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Last change
on this file since 616 was
336,
checked in by htune, 3 years ago
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Modifying setup.sh for conda install of python
More controls on the version of python and R
Introduction of a docs directory with tests and docs
Fredho&Najda
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File size:
1.2 KB
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| 1 | library(reticulate) |
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| 2 | # https://rstudio.github.io/reticulate/articles/versions.html |
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| 3 | # Sys.setenv(PYTHONUSERBASE="/home/hourdin/miniconda3/envs/python38/") |
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| 4 | # Sys.setenv(RETICULATE_PYTHON = "/home/hourdin/.local/lib/HighTune-pyhton3.8") |
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| 5 | # export RETICULATE_PYTHON=~/.local/lib/HighTune-pyhton3.8 |
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| 6 | # export RETICULATE_PYTHON=/home/hourdin/miniconda3/envs/python38/bin/python |
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| 7 | |
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| 8 | print("OKA") |
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| 9 | #use_python("/usr/bin/python3.8") |
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| 10 | #use_python("/home/hourdin/.local/lib/HighTune-pyhton3.8/bin/python3") |
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| 11 | #use_python("/home/hourdin/miniconda3/envs/python38/bin/python") |
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| 12 | #use_python("/home/hourdin/.local/lib/HighTune-pyhton3.8") |
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| 13 | print("OK1") |
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| 14 | |
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| 15 | # backtracing |
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| 16 | #options(error = function(e) print(rlang::trace_back())) |
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| 17 | #reticulate::use_condaenv(condaenv = "python38", conda = "/home/hourdin/miniconda3/bin/conda", required=T) |
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| 18 | |
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| 19 | #use_condaenv(condaenv = "python38", conda = "/home/hourdin/miniconda3/bin/conda", required=T) |
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| 20 | |
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| 21 | #conda_list() |
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| 22 | #py_discover_config() |
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| 23 | #py_config() |
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| 24 | #repl_python() |
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| 25 | |
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| 26 | #py_run_string("import scipy") |
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| 27 | #scipy <- import_from_path("scipy", path="/home/hourdin/miniconda3/envs/python38/lib/python3.8/site-packages/") |
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| 28 | scipy <- import("scipy") |
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| 29 | scipy$amin(c(1,3,5,7)) |
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| 30 | |
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| 31 | py_config() |
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| 32 | |
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| 33 | print("scipy version") |
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| 34 | print(py_get_attr(scipy, "__version__")) |
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