Description des outils et procédures utiles à la formation LMDZ

Installation testée sur une installation Ubuntu 18.04

Before anything, to avoid run commands with "sudo"

sudo bash

1. Installations automatiques par apt

apt update
apt upgrade

Base :

apt install -y csh ksh keychain ncftp vim vim-gnome xournal nfs-common  # base [[BR]]

apt install -y lftp [[BR]]
apt install -y synaptic gdebi                            # install paquets [[BR]]
apt install -y xfig grads imagemagick gv grace           # graphique [[BR]]
apt install -y texlive-base texlive-latex-extra texlive-lang-french latexdiff  texlive-publishers  #LaTeX [[BR]]
apt isntall -y latexmk texlive-science [[BR]]
apt install -y latex2html [[BR]]
apt install -y texlive-extra-utils texlive-font-utils # pdfjam [[BR]]

apt install -y inkscape gimp                             # dessin
apt install -y unoconv # conversion associee a libreoffice
apt install -y qpdfview # un visualiseur remplissant mieux les pdf
apt install -y traceroute # aide systeme

# Pour compilation dont LMDZ [[BR]]
apt install -y cdo nco netcdf-bin libnetcdf-dev ncview   # netcdf [[BR]]
apt install -y gfortran g++ libblas-dev subversion git   # fortran et svn [[BR]]
apt install -y openmpi-common libopenmpi-dev openmpi-bin # openmpi [[BR]]
apt install -y gifsicle [[BR]]
apt install -y ekiga                                        # conf renater [[BR]]
 [[BR]]
sudo snap install pdftk # Autre package de concatenation de pdf [[BR]]
apt install -y dos2unix [[BR]]

2. python

Not as root nor su

wget https://repo.continuum.io/miniconda/Miniconda3-latest-Linux-x86_64.sh
chmod +x ./Miniconda3-latest-Linux-x86_64.sh
./Miniconda3-latest-Linux-x86_64.sh

On a new window to reinitiate the environment

conda install netcdf4 h5py jinja2 pip sqlalchemy basemap matplotlib numpy scipy

sudo apt install -y python3-notebook jupyter jupyter-core python-ipykernel

conda create --name python2 python=2.7

conda create --name python3 python=3.7