Changeset 3435 for LMDZ6/trunk/libf/phy_common

Timestamp:

Jan 22, 2019, 4:21:59 PM (6 years ago)

Author:

Laurent Fairhead

Message:

"Historic" :-) commit merging the physics branch used for DYNAMICO with the LMDZ trunk.
The same physics branch can now be used seamlessly with the traditional lon-lat LMDZ
dynamical core and DYNAMICO.
Testing consisted in running a lon-lat LMDZ bucket simulation with the NPv6.1 physics package
with the original trunk sources and the merged sources. Tests were succesful in the sense that
numeric continuity was preserved in the restart files from both simulation. Further tests
included running both versions of the physics codes for one year in a LMDZOR setting in which
the restart files also came out identical.

Caution:

• as the physics package now manages unstructured grids, grid information needs to be transmitted

to the surface scheme ORCHIDEE. This means that the interface defined in surf_land_orchidee_mod.F90
is only compatible with ORCHIDEE version orchidee2.1 and later versions. If previous versions of
ORCHIDEE need to be used, the CPP key ORCHIDEE_NOUNSTRUCT needs to be set at compilation time.
This is done automatically if makelmdz/makelmdz_fcm are called with the veget orchidee2.0 switch

• due to a limitation in XIOS, the time at which limit conditions will be read in by DYNAMICO will be

delayed by one physic timestep with respect to the time it is read in by the lon-lat model. This is caused
by the line

IF (MOD(itime-1, lmt_pas) == 0 .OR. (jour_lu /= jour .AND. grid_type /= unstructured)) THEN ! time to read

in limit_read_mod.F90

Work still needed on COSP integration and XML files for DYNAMICO

EM, YM, LF

Location:

LMDZ6/trunk/libf/phy_common

Files:

• geometry_mod.F90 (modified) (5 diffs)
• init_print_control_mod.F90 (added)
• mod_phys_lmdz_mpi_data.F90 (modified) (4 diffs)
• mod_phys_lmdz_omp_data.F90 (modified) (4 diffs)
• mod_phys_lmdz_para.F90 (modified) (1 diff)
• physics_distribution_mod.F90 (modified) (2 diffs)
• print_control_mod.F90 (modified) (1 diff)

LMDZ6/trunk/libf/phy_common/geometry_mod.F90

@@ -30 +30 @@
 !$OMP THREADPRIVATE(cell_area)
 
+  INTEGER,SAVE,ALLOCATABLE :: ind_cell_glo(:)      ! global indice of a local cell
+!$OMP THREADPRIVATE(ind_cell_glo)
 
 CONTAINS
@@ -35 +37 @@
   SUBROUTINE init_geometry(klon,longitude_,latitude_, &
                            boundslon_,boundslat_, &
-                           cell_area_,dx_,dy_)
+                           cell_area_,ind_cell_glo_,dx_,dy_)
   USE mod_grid_phy_lmdz, ONLY: nvertex
   USE nrtype, ONLY : PI
@@ -45 +47 @@
     REAL,INTENT(IN) :: boundslat_(klon,nvertex)
     REAL,INTENT(IN) :: cell_area_(klon)
+    INTEGER,OPTIONAL,INTENT(IN) :: ind_cell_glo_(klon)
     REAL,OPTIONAL,INTENT(IN) :: dx_(klon)
     REAL,OPTIONAL,INTENT(IN) :: dy_(klon)
@@ -55 +58 @@
     ALLOCATE(boundslat(klon,nvertex))
     ALLOCATE(cell_area(klon))
+    IF (PRESENT(ind_cell_glo_)) ALLOCATE(ind_cell_glo(klon))
     IF (PRESENT(dx_)) ALLOCATE(dx(klon))
     IF (PRESENT(dy_))ALLOCATE(dy(klon))
@@ -65 +69 @@
     boundslat(:,:) = boundslat_(:,:)
     cell_area(:) = cell_area_(:)
+    IF (PRESENT(ind_cell_glo_)) ind_cell_glo(:) = ind_cell_glo_(:)
     IF (PRESENT(dx_)) dx(:) = dx_(:)
     IF (PRESENT(dy_)) dy(:) = dy_(:)

LMDZ6/trunk/libf/phy_common/mod_phys_lmdz_mpi_data.F90

@@ -3 +3 @@
 !
 MODULE mod_phys_lmdz_mpi_data
-!  USE mod_const_mpi
   
   INTEGER,SAVE :: ii_begin
@@ -36 +35 @@
   INTEGER,SAVE :: mpi_size
   INTEGER,SAVE :: mpi_master
-!  INTEGER,SAVE :: mpi_root
   LOGICAL,SAVE :: is_mpi_root
   LOGICAL,SAVE :: is_using_mpi
   
   
-!  LOGICAL,SAVE :: is_north_pole
-!  LOGICAL,SAVE :: is_south_pole
   LOGICAL,SAVE :: is_north_pole_dyn
   LOGICAL,SAVE :: is_south_pole_dyn
@@ -50 +46 @@
 CONTAINS
   
-!  SUBROUTINE Init_phys_lmdz_mpi_data(iim,jjp1,nb_proc,distrib)
   SUBROUTINE init_phys_lmdz_mpi_data(nbp, nbp_lon, nbp_lat, communicator)
-!  USE mod_const_mpi, ONLY : COMM_LMDZ
   IMPLICIT NONE
 #ifdef CPP_MPI
     INCLUDE 'mpif.h'
 #endif
-    INTEGER,INTENT(in) :: nbp
-    INTEGER,INTENT(in) :: nbp_lon
-    INTEGER,INTENT(in) :: nbp_lat
-    INTEGER,INTENT(in) :: communicator
+    INTEGER,INTENT(IN) :: nbp
+    INTEGER,INTENT(IN) :: nbp_lon
+    INTEGER,INTENT(IN) :: nbp_lat
+    INTEGER,INTENT(IN) :: communicator
     
     INTEGER,ALLOCATABLE :: distrib(:)
@@ -189 +183 @@
 
   SUBROUTINE print_module_data
-!  USE print_control_mod, ONLY: lunout
+  USE print_control_mod, ONLY: lunout
   IMPLICIT NONE
-  INCLUDE "iniprint.h" 
+!  INCLUDE "iniprint.h" 
   
     WRITE(lunout,*) 'ii_begin =', ii_begin

LMDZ6/trunk/libf/phy_common/mod_phys_lmdz_omp_data.F90

@@ -7 +7 @@
   INTEGER,SAVE :: omp_rank
   LOGICAL,SAVE :: is_omp_root
+  LOGICAL,SAVE :: is_omp_master  ! alias of is_omp_root
   LOGICAL,SAVE :: is_using_omp
   LOGICAL,SAVE :: is_north_pole_phy, is_south_pole_phy
@@ -17 +18 @@
   INTEGER,SAVE :: klon_omp_begin
   INTEGER,SAVE :: klon_omp_end
-!$OMP  THREADPRIVATE(omp_rank,klon_omp,is_omp_root,klon_omp_begin,klon_omp_end)
+!$OMP  THREADPRIVATE(omp_rank,klon_omp,is_omp_root,is_omp_master,klon_omp_begin,klon_omp_end)
 !$OMP  THREADPRIVATE(is_north_pole_phy, is_south_pole_phy)
 
@@ -60 +61 @@
    ELSE
      abort_message = 'ANORMAL : OMP_MASTER /= 0'
-     CALL abort_gcm (modname,abort_message,1)
+     CALL abort_physic (modname,abort_message,1)
    ENDIF
 !$OMP END MASTER
-
+   is_omp_master=is_omp_root
 
 !$OMP MASTER 
@@ -106 +107 @@
 
   SUBROUTINE Print_module_data
+  USE print_control_mod, ONLY: lunout
   IMPLICIT NONE
-  INCLUDE "iniprint.h"
+!  INCLUDE "iniprint.h"
 
 !$OMP CRITICAL  

LMDZ6/trunk/libf/phy_common/mod_phys_lmdz_para.F90

@@ -49 +49 @@
   SUBROUTINE Test_transfert
   USE mod_grid_phy_lmdz
+  USE print_control_mod, ONLY: lunout
   IMPLICIT NONE
-    INCLUDE "iniprint.h"
+!    INCLUDE "iniprint.h"
  
     REAL :: Test_Field1d_glo(klon_glo,nbp_lev)

LMDZ6/trunk/libf/phy_common/physics_distribution_mod.F90

@@ -10 +10 @@
                                        nbp, nbp_lon, nbp_lat, nbp_lev, &
                                        communicator)
-  USE mod_phys_lmdz_para, ONLY: init_phys_lmdz_para
+  USE mod_phys_lmdz_para, ONLY: init_phys_lmdz_para, klon_omp
   USE mod_grid_phy_lmdz, ONLY: init_grid_phy_lmdz
+  USE dimphy, ONLY : Init_dimphy
+  USE infotrac_phy, ONLY : type_trac
+#ifdef REPROBUS
+  USE CHEM_REP, ONLY : Init_chem_rep_phys
+#endif
+
   IMPLICIT NONE
     INTEGER,INTENT(IN) :: grid_type 
@@ -24 +30 @@
     CALL init_grid_phy_lmdz(grid_type,nvertex, nbp_lon,nbp_lat,nbp_lev)
     CALL init_phys_lmdz_para(nbp,nbp_lon, nbp_lat, communicator)
+!$OMP PARALLEL
+    CALL init_dimphy(klon_omp,nbp_lev)
+
+! Initialization of Reprobus
+    IF (type_trac == 'repr') THEN
+#ifdef REPROBUS
+       CALL Init_chem_rep_phys(klon_omp,nbp_lev)
+#endif
+    END IF
+
+!$OMP END PARALLEL
 
   END SUBROUTINE init_physics_distribution  

LMDZ6/trunk/libf/phy_common/print_control_mod.F90

@@ -7 +7 @@
 !$OMP THREADPRIVATE(lunout,prt_level,debug)
 
+  ! NB: Module variable Initializations done by set_print_control
+  !     routine from init_print_control_mod to avoid circular
+  !     module dependencies
+
 CONTAINS
 
-  SUBROUTINE init_print_control
-  USE ioipsl_getin_p_mod, ONLY : getin_p
-  USE mod_phys_lmdz_para, ONLY: is_omp_root, is_master
+  SUBROUTINE set_print_control(lunout_,prt_level_,debug_)
   IMPLICIT NONE
-
-    LOGICAL :: opened
-    INTEGER :: number
+    INTEGER :: lunout_
+    INTEGER :: prt_level_
+    LOGICAL :: debug_
+      
+    lunout = lunout_
+    prt_level = prt_level_
+    debug = debug_
     
-    !Config  Key  = prt_level
-    !Config  Desc = niveau d'impressions de débogage
-    !Config  Def  = 0
-    !Config  Help = Niveau d'impression pour le débogage
-    !Config         (0 = minimum d'impression)
-    prt_level = 0
-    CALL getin_p('prt_level',prt_level)
-
-    !Config  Key  = lunout
-    !Config  Desc = unite de fichier pour les impressions
-    !Config  Def  = 6
-    !Config  Help = unite de fichier pour les impressions 
-    !Config         (defaut sortie standard = 6)
-    lunout=6
-    CALL getin_p('lunout', lunout)
-
-    IF (is_omp_root) THEN
-      IF (lunout /= 5 .and. lunout /= 6) THEN
-         INQUIRE(FILE='lmdz.out_0000',OPENED=opened,NUMBER=number)
-         IF (opened) THEN
-           lunout=number
-         ELSE
-           OPEN(UNIT=lunout,FILE='lmdz.out_0000',ACTION='write',  &
-                STATUS='unknown',FORM='formatted')
-         ENDIF
-      ENDIF
-    ENDIF
-
-    !Config  Key  = debug
-    !Config  Desc = mode debogage
-    !Config  Def  = false
-    !Config  Help = positionne le mode debogage
-
-    debug = .FALSE.
-    CALL getin_p('debug',debug)
-    
-    IF (is_master) THEN
-      WRITE(lunout,*)"init_print_control: prt_level=",prt_level
-      WRITE(lunout,*)"init_print_control: lunout=",lunout
-      WRITE(lunout,*)"init_print_control: debug=",debug      
-    ENDIF
-    
-  END SUBROUTINE init_print_control  
+  END SUBROUTINE set_print_control
 
 END MODULE print_control_mod